| ชื่อเรื่อง | : | Analysis of complete genome sequences of G9P[19] rotavirus strains from human and piglet with diarrhea provides evidence for whole-genome interspecies transmission of nonreassorted porcine rotavirus |
| นักวิจัย | : | Yodmeeklin A. , Khamrin P. , Chuchaona W. , Kumthip K. , Kongkaew A. , Vachirachewin R. , Okitsu S. , Ushijima H. , Maneekarn N. |
| คำค้น | : | - |
| หน่วยงาน | : | มหาวิทยาลัยเชียงใหม่ |
| ผู้ร่วมงาน | : | - |
| ปีพิมพ์ | : | 2560 |
| อ้างอิง | : | 15671348 , 2-s2.0-84998631545 , 10.1016/j.meegid.2016.11.021 , https://www.scopus.com/inward/record.uri?partnerID=HzOxMe3b&scp=84998631545&origin=inward , http://cmuir.cmu.ac.th/jspui/handle/6653943832/41087 |
| ที่มา | : | - |
| ความเชี่ยวชาญ | : | - |
| ความสัมพันธ์ | : | - |
| ขอบเขตของเนื้อหา | : | - |
| บทคัดย่อ/คำอธิบาย | : | © 2016 Whole genomes of G9P[19] human (RVA/Human-wt/THA/CMH-S070-13/2013/G9P[19] ) and porcine (RVA/Pig-wt/THA/CMP-015-12/2012/G9P[19]) rotaviruses concurrently detected in the same geographical area in northern Thailand were sequenced and analyzed for their genetic relationships using bioinformatic tools. The complete genome sequence of human rotavirus RVA/Human-wt/THA/CMH-S070-13/2013/G9P[19] was most closely related to those of porcine rotavirus RVA/Pig-wt/THA/CMP-015-12/2012/G9P[19] and to those of porcine-like human and porcine rotaviruses reference strains than to those of human rotavirus reference strains. The genotype constellation of G9P[19] detected in human and piglet were identical and displayed as the G9-P[19]-I5-R1-C1-M1-A8-N1-T1-E1-H1 genotypes with the nucleotide sequence identities of VP7, VP4, VP6, VP1, VP2, VP3, NSP1, NSP2, NSP3, NSP4, and NSP5 at 99.0%, 99.5%, 93.2%, 97.7%, 97.7%, 85.6%, 89.5%, 93.2%, 92.9%, 94.0%, and 98.1%, respectively. The findings indicate that human rotavirus strain RVA/Human-wt/THA/CMH-S070-13/2013/G9P[19] containing the genome segments of porcine genetic backbone is most likely a human rotavirus of porcine origin. Our data provide an evidence of interspecies transmission and whole-genome transmission of nonreassorted G9P[19] porcine RVA to human occurring in nature in northern Thailand. |
| บรรณานุกรม | : |
Yodmeeklin A. , Khamrin P. , Chuchaona W. , Kumthip K. , Kongkaew A. , Vachirachewin R. , Okitsu S. , Ushijima H. , Maneekarn N. . (2560). Analysis of complete genome sequences of G9P[19] rotavirus strains from human and piglet with diarrhea provides evidence for whole-genome interspecies transmission of nonreassorted porcine rotavirus.
เชียงใหม่ : มหาวิทยาลัยเชียงใหม่ . Yodmeeklin A. , Khamrin P. , Chuchaona W. , Kumthip K. , Kongkaew A. , Vachirachewin R. , Okitsu S. , Ushijima H. , Maneekarn N. . 2560. "Analysis of complete genome sequences of G9P[19] rotavirus strains from human and piglet with diarrhea provides evidence for whole-genome interspecies transmission of nonreassorted porcine rotavirus".
เชียงใหม่ : มหาวิทยาลัยเชียงใหม่ . Yodmeeklin A. , Khamrin P. , Chuchaona W. , Kumthip K. , Kongkaew A. , Vachirachewin R. , Okitsu S. , Ushijima H. , Maneekarn N. . "Analysis of complete genome sequences of G9P[19] rotavirus strains from human and piglet with diarrhea provides evidence for whole-genome interspecies transmission of nonreassorted porcine rotavirus."
เชียงใหม่ : มหาวิทยาลัยเชียงใหม่ , 2560. Print. Yodmeeklin A. , Khamrin P. , Chuchaona W. , Kumthip K. , Kongkaew A. , Vachirachewin R. , Okitsu S. , Ushijima H. , Maneekarn N. . Analysis of complete genome sequences of G9P[19] rotavirus strains from human and piglet with diarrhea provides evidence for whole-genome interspecies transmission of nonreassorted porcine rotavirus. เชียงใหม่ : มหาวิทยาลัยเชียงใหม่ ; 2560.
|
